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  5. Ppi_g06255

Ppi_g06255 (ATUXS3, UXS3)


Aliases : ATUXS3, UXS3

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g06255
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT2G28760 UXS6 UDP-XYL synthase 6 0.03 OrthoFinder output from all 47 species
AT3G53520 UXS1, ATUXS1 UDP-glucuronic acid decarboxylase 1 0.02 OrthoFinder output from all 47 species
AT3G62830 AUD1, UXS2, ATUXS2 NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g02095 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02174 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18766 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g37031 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05015 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00514 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00559 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.21G064200.1 AUD1, UXS2,... EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.33G037100.1 AUD1, UXS2,... EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g02694 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09942 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03666 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025597001 UXS1, ATUXS1 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
LOC_Os01g62020.1 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.03 OrthoFinder output from all 47 species
LOC_Os03g16980.1 UXS6, LOC_Os03g16980 UDP-D-glucuronic acid decarboxylase 0.05 OrthoFinder output from all 47 species
Len_g17737 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01266 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_7855g0010 UXS5 UDP-D-glucuronic acid decarboxylase 0.04 OrthoFinder output from all 47 species
Mp2g19470.1 UXS5 UDP-D-glucuronic acid decarboxylase 0.04 OrthoFinder output from all 47 species
Msp_g03130 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40243 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11590 ATUXS3, UXS3 EC_4.1 carbon-carbon lyase & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009542 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: CDS=1-1377 0.04 OrthoFinder output from all 47 species
Sam_g13460 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g005810.4.1 UXS1, ATUXS1,... UDP-D-glucuronic acid decarboxylase 0.02 OrthoFinder output from all 47 species
Spa_g12500 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001241_P001 UXS5, Zm00001e001241 UDP-D-glucuronic acid decarboxylase 0.04 OrthoFinder output from all 47 species
Zm00001e019359_P001 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.02 OrthoFinder output from all 47 species
Zm00001e031428_P001 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.02 OrthoFinder output from all 47 species
Zm00001e038475_P001 UXS6, Zm00001e038475 UDP-D-glucuronic acid decarboxylase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 31 325
No external refs found!