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  5. Ppi_g05297

Ppi_g05297 (UBP23)


Aliases : UBP23

Description : not classified & original description: none


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05297

Target Alias Description ECC score Gene Family Method Actions
Adi_g004567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098237 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08851 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09670 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31799 UBP19 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038082001 UBP25 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
LOC_Os02g14730.1 UBP15, LOC_Os02g14730 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Mp2g05560.1 UBP18 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Pnu_g19055 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26844 No alias deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g056520.3.1 UBP25, Solyc07g056520 deubiquitinase (UBP25) 0.02 OrthoFinder output from all 47 species
Solyc07g061780.4.1 UBP15, Solyc07g061780 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Solyc12g096430.1.1 UBP18, Solyc12g096430 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Tin_g10072 UBP18 deubiquiTinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015501_P001 UBP21, Zm00001e015501 Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 158 461
No external refs found!