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  5. Ppi_g05220

Ppi_g05220


Description : not classified & original description: none


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05220

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00253600 evm_27.TU.AmTr_v1... Uncharacterized protein At3g28850 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G57070 No alias Glutaredoxin family protein 0.03 OrthoFinder output from all 47 species
AT5G13810 No alias Glutaredoxin family protein 0.03 OrthoFinder output from all 47 species
Aev_g02462 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Aev_g25963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08420 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Aob_g13652 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Aob_g35924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26067 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Aop_g29960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05749.t1 Aspi01Gene05749 actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene30600.t1 Aspi01Gene30600 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31955.t1 Aspi01Gene31955 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38535.t1 Aspi01Gene38535 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042605 No alias not classified & original description: CDS=1-1131 0.04 OrthoFinder output from all 47 species
Azfi_s0188.g056819 No alias not classified & original description: CDS=1654-3384 0.04 OrthoFinder output from all 47 species
Ceric.04G013200.1 Ceric.04G013200 not classified & original description: pacid=50630697... 0.03 OrthoFinder output from all 47 species
Ceric.07G055600.1 Ceric.07G055600 not classified & original description: pacid=50627902... 0.03 OrthoFinder output from all 47 species
Ceric.35G055600.1 Ceric.35G055600 actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Ceric.38G044900.1 Ceric.38G044900 not classified & original description: pacid=50579532... 0.03 OrthoFinder output from all 47 species
Ehy_g31451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01609 No alias Uncharacterized protein At3g28850 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g61350.1 LOC_Os01g61350 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g03221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07428 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Pir_g14419 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Pp3c5_15250V3.1 Pp3c5_15250 Glutaredoxin family protein 0.03 OrthoFinder output from all 47 species
Ppi_g31092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005034 No alias not classified & original description: CDS=1-1650 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007137 No alias not classified & original description: CDS=193-2466 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018650 No alias not classified & original description: CDS=1-1362 0.02 OrthoFinder output from all 47 species
Solyc02g087850.1.1 Solyc02g087850 Uncharacterized protein At3g28850 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g12739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47058 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Tin_g09338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 371 436
No external refs found!