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  5. Ppi_g04670

Ppi_g04670


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g04670

Target Alias Description ECC score Gene Family Method Actions
Adi_g047696 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25631 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36900 AT-GTL1, GTL1, AT-GTL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21159 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os10g37240.4 LOC_Os10g37240 Trihelix transcription factor GT-2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g19264 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10291373g0010 PTL no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_79519g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_934266g0010 PTL transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Pir_g59860 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 619 706
IPR044822 Myb_DNA-bind_4 309 395
No external refs found!