Ppi_g04503

Description : not classified & original description: none

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g04503
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00176790	BCS1,...	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT2G46620	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
Aev_g07534	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g30887	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g15220	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g38293	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene06413.t1	Aspi01Gene06413	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene06430.t1	Aspi01Gene06430	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene06431.t1	Aspi01Gene06431	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene12634.t1	Aspi01Gene12634	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12635.t1	Aspi01Gene12635	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30040.t1	Aspi01Gene30040	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g30278	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g17234	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g44256	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g45785	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g30746	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g36793	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g01247	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09734	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g10044	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g11177	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g16997	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01027397001	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01029545001	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_34238	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os01g19260.1	AATP1, LOC_Os01g19260	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os01g40140.1	LOC_Os01g40140	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os03g38800.1	LOC_Os03g38800	AAA-ATPase At5g17740 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os03g58800.1	AATP1, LOC_Os03g58800	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os05g51130.1	BCS1, LOC_Os05g51130	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os06g48240.1	LOC_Os06g48240	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os06g48250.1	LOC_Os06g48250	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os10g37500.1	LOC_Os10g37500	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g28550.1	LOC_Os12g28550	AAA-ATPase At5g40000 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os12g28590.1	AATP1, LOC_Os12g28590	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g44190.1	AATP1, LOC_Os12g44190	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
MA_10435468g0020	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_157759g0010	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Msp_g10169	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g11419	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g35356	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g26527	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g16349	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g31183	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011979	No alias	not classified & original description: CDS=1-1437	0.03	OrthoFinder output from all 47 species
Solyc01g096230.4.1	Solyc01g096230	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Solyc12g055810.1.1	Solyc12g055810	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Spa_g11336	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g26231	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g13421	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e003358_P001	AATP1, Zm00001e003358	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Zm00001e011416_P001	Zm00001e011416	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Zm00001e038158_P001	AATP1, Zm00001e038158	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	31	120
IPR003959	ATPase_AAA_core	249	389

External Links

No external refs found!

Ppi_g04503

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation