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  5. Ppi_g03852

Ppi_g03852


Description : not classified & original description: none


Gene families : OG0010123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03852

Target Alias Description ECC score Gene Family Method Actions
Adi_g079616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G013000.1 Ceric.39G013000 not classified & original description: pacid=50583026... 0.06 OrthoFinder output from all 47 species
Dac_g16601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g26972 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 532 560
IPR002885 Pentatricopeptide_repeat 403 427
IPR002885 Pentatricopeptide_repeat 503 524
IPR002885 Pentatricopeptide_repeat 228 255
IPR002885 Pentatricopeptide_repeat 303 327
IPR002885 Pentatricopeptide_repeat 330 374
No external refs found!