Aliases : SKIP
Description : component *(SKIP/MAC6) of MAC spliceosome-associated complex & original description: none
Gene families : OG0003767 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003767_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g03835 | |
Cluster | HCCA: Cluster_43 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g03422 | SKIP | component *(SKIP/MAC6) of MAC spliceosome-associated... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000944.22 | SKIP | RNA processing.RNA splicing.spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01015321001 | SKIP | RNA processing.RNA splicing.spliceosome-associated... | 0.04 | OrthoFinder output from all 47 species | |
MA_70500g0010 | SKIP | component SKIP/MAC6 of non-snRNP MOS4-associated complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000398 | mRNA splicing, via spliceosome | IEA | Interproscan |
CC | GO:0005681 | spliceosomal complex | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | HCCA |
BP | GO:0001510 | RNA methylation | IEP | HCCA |
MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004408 | holocytochrome-c synthase activity | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005739 | mitochondrion | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | HCCA |
MF | GO:0016846 | carbon-sulfur lyase activity | IEP | HCCA |
BP | GO:0031167 | rRNA methylation | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0070475 | rRNA base methylation | IEP | HCCA |
BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004015 | SKI-int_prot_SKIP_SNW-dom | 180 | 338 |
No external refs found! |