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  5. Ppi_g03807

Ppi_g03807 (ERF-1, ATERF-1)


Aliases : ERF-1, ATERF-1

Description : subgroup ERF-IX transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03807
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G01250 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G20310 ERF7, ATERF7, ATERF-7 ethylene response factor 7 0.03 OrthoFinder output from all 47 species
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G11590 TINY2 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g14600 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ala_g16411 TINY2 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aop_g36451 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21527.t1 WIN1, SHN1,... subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z027000.1 ERF110, Ceric.1Z027000 not classified & original description: pacid=50632868... 0.02 OrthoFinder output from all 47 species
Ceric.22G080600.1 ATERF-9, ERF9,... not classified & original description: pacid=50614657... 0.03 OrthoFinder output from all 47 species
Ceric.34G045400.1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g15023 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g12401 ERF110 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25360 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g12592 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g31739 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01036228001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
Len_g01640 DEAR4, RAP2.10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_99821g0010 TMO3, CRF2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Msp_g10978 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Msp_g37745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04870 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21132 ORA47 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24059 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g15405 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc12g056980.1.1 RAP2.4, Solyc12g056980 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Tin_g03837 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g11217 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g37276 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 328 378
No external refs found!