Ppi_g03753

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g03753
Cluster	HCCA: Cluster_142

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00092510	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
Aop_g26785	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.37G019000.1	Ceric.37G019000	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
GSVIVT01015852001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
MA_14449g0010	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Ore_g05557	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g26500	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g20339	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g20523	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016132	No alias	pectin methylesterase & original description: CDS=1-684	0.02	OrthoFinder output from all 47 species
Sam_g16125	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Solyc07g065350.2.1	QRT1, Solyc07g065350	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Zm00001e032213_P001	Zm00001e032213	pectin methylesterase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	95	389

External Links

No external refs found!

Ppi_g03753

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation