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  5. Ppi_g03278

Ppi_g03278 (SDG23, SUVH6)


Aliases : SDG23, SUVH6

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03278

Target Alias Description ECC score Gene Family Method Actions
AT5G04940 SUVH1 SU(VAR)3-9 homolog 1 0.02 OrthoFinder output from all 47 species
Adi_g112672 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aev_g06142 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aop_g13753 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.02G055100.1 SUVH1, Ceric.02G055100 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.13G012400.1 SDG23, SUVH6,... not classified & original description: pacid=50636550... 0.03 OrthoFinder output from all 47 species
Dac_g12506 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
GSVIVT01005913001 SUVH5, SGD9 Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
GSVIVT01032986001 SDG33, SUVH4, KYP Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Ore_g17339 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Pir_g52142 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Solyc06g060960.3.1 SUVH5, SGD9,... class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
Spa_g05724 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003105 SRA_YDG 865 1019
IPR007728 Pre-SET_dom 1045 1141
IPR001214 SET_dom 1160 1290
No external refs found!