1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g03195

Ppi_g03195 (VCL1, EMB258, MAN)


Aliases : VCL1, EMB258, MAN

Description : component *(VPS16/VCL1) of HOPS/CORVET membrane tethering complexes & original description: none


Gene families : OG0004533 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004533_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03195
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Als_g01127 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.03 OrthoFinder output from all 47 species
Aop_g08601 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000157.79 No alias Vesicle trafficking.target membrane... 0.02 OrthoFinder output from all 47 species
Dcu_g04890 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.03 OrthoFinder output from all 47 species
Lfl_g10179 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
MA_10426322g0010 VCL1, EMB258, MAN component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes 0.02 OrthoFinder output from all 47 species
Zm00001e028014_P001 VCL1, EMB258,... component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006926 Vps16_N 7 406
IPR006925 Vps16_C 510 821
No external refs found!