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  5. Ppi_g03154

Ppi_g03154


Description : not classified & original description: none


Gene families : OG0011282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011282_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03154

Target Alias Description ECC score Gene Family Method Actions
Aob_g12285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.39G003300.1 Ceric.39G003300 not classified & original description: pacid=50583073... 0.03 OrthoFinder output from all 47 species
Msp_g15371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10860 No alias group-II intron mitochondrial splicing factor *(MISF68)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 480 504
IPR002885 Pentatricopeptide_repeat 548 571
IPR002885 Pentatricopeptide_repeat 194 243
IPR002885 Pentatricopeptide_repeat 334 383
IPR002885 Pentatricopeptide_repeat 405 453
IPR002885 Pentatricopeptide_repeat 264 313
IPR002885 Pentatricopeptide_repeat 507 536
IPR002885 Pentatricopeptide_repeat 157 188
No external refs found!