Ppi_g03107 (emb1629, APO2)

Aliases : emb1629, APO2

Description : organelle RNA splicing factor *(APO) & original description: none

Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g03107
Cluster	HCCA: Cluster_273

Target	Alias	Description	ECC score	Gene Family Method
Adi_g022368	emb1629, APO2	organelle RNA splicing factor *(APO) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g04268	APO1	organelle RNA splicing factor *(APO) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g03932	emb1629, APO2	organelle RNA splicing factor *(APO) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.26G036600.1	emb1629, APO2,...	organelle RNA splicing factor *(APO) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g09606	emb1629, APO2	organelle RNA splicing factor *(APO) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g41978	emb1629, APO2	organelle RNA splicing factor *(APO) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01018392001	APO1	APO protein 1, chloroplastic OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os04g52520.4	APO1, LOC_Os04g52520	APO protein 1, chloroplastic OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os07g40920.1	APO3, LOC_Os07g40920	APO protein 3, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012737	APO1	organelle RNA splicing factor *(APO) & original...	0.03	OrthoFinder output from all 47 species
Solyc08g080250.4.1	APO1, Solyc08g080250	APO protein 1, chloroplastic OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR023342	APO_dom	51	238
IPR023342	APO_dom	301	413

External Links

No external refs found!