Ppi_g03018

Description : component *(SRP54) of SRP (signal recognition particle) complex & original description: none

Gene families : OG0003514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003514_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g03018

Target	Alias	Description	ECC score	Gene Family Method
Als_g10737	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.03	OrthoFinder output from all 47 species
Aob_g08410	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
Ceric.01G080500.1	Ceric.01G080500	component *(SRP54) of SRP (signal recognition particle)...	0.05	OrthoFinder output from all 47 species
Dcu_g01603	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.03	OrthoFinder output from all 47 species
Gb_39090	No alias	component SRP54 of SRP (signal recognition particle) complex	0.02	OrthoFinder output from all 47 species
Lfl_g04723	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.05	OrthoFinder output from all 47 species
MA_10429875g0010	No alias	component SRP54 of SRP (signal recognition particle) complex	0.02	OrthoFinder output from all 47 species
Mp1g19000.1	No alias	component SRP54 of SRP (signal recognition particle) complex	0.02	OrthoFinder output from all 47 species
Sam_g06485	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.03	OrthoFinder output from all 47 species
Solyc03g116810.4.1	Solyc03g116810	component SRP54 of SRP (signal recognition particle) complex	0.02	OrthoFinder output from all 47 species
Zm00001e028974_P003	Zm00001e028974	component SRP54 of SRP (signal recognition particle) complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	None	Extended
BP	GO:0006613	cotranslational protein targeting to membrane	None	Extended
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008312	7S RNA binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0045047	protein targeting to ER	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
CC	GO:0048500	signal recognition particle	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070972	protein localization to endoplasmic reticulum	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
BP	GO:0016482	cytosolic transport	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	HCCA
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000897	SRP54_GTPase_dom	102	296
IPR013822	Signal_recog_particl_SRP54_hlx	6	83
IPR004125	Signal_recog_particle_SRP54_M	328	429

External Links

No external refs found!

Ppi_g03018

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation