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  5. Ppi_g02980

Ppi_g02980


Description : not classified & original description: none


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02980
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AT1G05280 No alias Protein of unknown function (DUF604) 0.02 OrthoFinder output from all 47 species
Dac_g04658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_31866 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_36895 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g06142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 233 488
No external refs found!