Ppi_g01193 (NOF1)

Aliases : NOF1

Description : regulatory protein *(NOF1) of rDNA transcription & original description: none

Gene families : OG0005501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005501_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g01193

Target	Alias	Description	ECC score	Gene Family Method
Ala_g10991	NOF1	regulatory protein *(NOF1) of rDNA transcription &...	0.04	OrthoFinder output from all 47 species
Aop_g26239	NOF1	regulatory protein *(NOF1) of rDNA transcription &...	0.03	OrthoFinder output from all 47 species
Azfi_s0050.g031107	NOF1	regulatory protein *(NOF1) of rDNA transcription &...	0.03	OrthoFinder output from all 47 species
Cre04.g218300	NOF1	RNA biosynthesis.rRNA biogenesis.NOF1 control factor	0.02	OrthoFinder output from all 47 species
GSVIVT01010908001	NOF1	RNA biosynthesis.rRNA biogenesis.NOF1 control factor	0.03	OrthoFinder output from all 47 species
LOC_Os05g22920.1	NOF1, LOC_Os05g22920	rDNA transcriptional regulator (NOF1)	0.02	OrthoFinder output from all 47 species
Lfl_g09232	NOF1	regulatory protein *(NOF1) of rDNA transcription &...	0.02	OrthoFinder output from all 47 species
Nbi_g24583	NOF1	regulatory protein *(NOF1) of rDNA transcription &...	0.02	OrthoFinder output from all 47 species
Sam_g12400	No alias	regulatory protein *(NOF1) of rDNA transcription &...	0.03	OrthoFinder output from all 47 species
Smo446868	NOF1	RNA biosynthesis.rRNA biogenesis.NOF1 control factor	0.02	OrthoFinder output from all 47 species
Solyc07g009350.4.1	NOF1, Solyc07g009350	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Tin_g18828	NOF1	regulatory protein *(NOF1) of rDNA transcription &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
MF	GO:0030515	snoRNA binding	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
MF	GO:0034511	U3 snoRNA binding	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010678	UTP25	243	716

External Links

No external refs found!

Ppi_g01193 (NOF1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation