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  5. Ppi_g01148

Ppi_g01148


Description : auxiliary VPS23-interacting component *(CFS1) of ESCRT-I complex & original description: none


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g01148
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT1G29800 No alias RING/FYVE/PHD-type zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g056766 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Cre16.g668550 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os07g17130.1 LOC_Os07g17130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15854 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ore_g05728 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ore_g36752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06477 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Solyc07g017500.3.1 Solyc07g017500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g31118 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Zm00001e033254_P004 Zm00001e033254 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037246_P003 Zm00001e037246 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR007461 Ysc84_actin-binding 431 555
IPR000306 Znf_FYVE 249 314
No external refs found!