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  5. Ppi_g00845

Ppi_g00845


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0001320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g00845
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT3G20395 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Dac_g06734 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01005189001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0188.g025140 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc02g083400.3.1 NIP2, Solyc02g083400 NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g09669 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g03831 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 208 251
No external refs found!