Ppi_g00671

Description : component *(eEF1B-beta/-delta) of eEF1B eEF1A-GDP-recycling complex & original description: none

Gene families : OG0001031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001031_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g00671
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
AT5G19510	No alias	Translation elongation factor EF1B/ribosomal protein S6...	0.05	OrthoFinder output from all 47 species
Ceric.32G024000.1	Ceric.32G024000	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Dac_g26124	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
LOC_Os07g46750.1	LOC_Os07g46750	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.03	OrthoFinder output from all 47 species
MA_102713g0020	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.02	OrthoFinder output from all 47 species
Msp_g10669	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
Ppi_g04220	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Sam_g17349	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.04	OrthoFinder output from all 47 species
Sam_g23640	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Sam_g31515	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.04	OrthoFinder output from all 47 species
Solyc01g098000.3.1	Solyc01g098000	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.03	OrthoFinder output from all 47 species
Solyc07g016150.4.1	Solyc07g016150	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.05	OrthoFinder output from all 47 species
Solyc11g072190.2.1	Solyc11g072190	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.04	OrthoFinder output from all 47 species
Spa_g07923	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Spa_g51035	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
Tin_g21340	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014038	EF1B_bsu/dsu_GNE	157	245

External Links

No external refs found!

Ppi_g00671

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation