Ppi_g00498 (TRXF2, ATF2)


Aliases : TRXF2, ATF2

Description : F-type thioredoxin *(Trx-F) & original description: none


Gene families : OG0001099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g00498
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT3G02730 ATF1, TRXF1 thioredoxin F-type 1 0.03 OrthoFinder output from all 47 species
AT5G16400 TRXF2, ATF2 thioredoxin F2 0.03 OrthoFinder output from all 47 species
Aev_g03766 ATF1, TRXF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06364 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00422 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001249.9 ATF1, TRXF1 Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Cre05.g243050 TRXF2, ATF2 Redox homeostasis.chloroplast redox homeostasis.F-type... 0.04 OrthoFinder output from all 47 species
Dde_g25843 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019070001 TRXF2, ATF2 Redox homeostasis.chloroplast redox homeostasis.F-type... 0.03 OrthoFinder output from all 47 species
Mp2g20740.1 ATF1, TRXF1 F-type thioredoxin 0.02 OrthoFinder output from all 47 species
Ore_g14018 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26787 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12320 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g056300.4.1 ATF1, TRXF1,... F-type thioredoxin 0.03 OrthoFinder output from all 47 species
Zm00001e027512_P002 TRXF2, ATF2,... F-type thioredoxin 0.03 OrthoFinder output from all 47 species
Zm00001e040421_P002 TRXF2, ATF2,... F-type thioredoxin 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 54 154
No external refs found!