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  5. AMTR_s03508p00001080

AMTR_s03508p00001080 (OPT4, ATOPT4,...)


Aliases : OPT4, ATOPT4, evm_27.TU.AmTr_v1.0_scaffold03508.1

Description : Solute transport.carrier-mediated transport.OPT family.oligopeptide transporter (OPT-type)


Gene families : OG0011337 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011337_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s03508p00001080
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Als_g38497 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.04 OrthoFinder output from all 47 species
MA_334338g0010 OPT7, ATOPT7 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
MA_37576g0020 OPT7, ATOPT7 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 162 331
IPR004813 OPT 2 134
No external refs found!