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  5. AMTR_s01723p00004890

AMTR_s01723p00004890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold01723.1

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG0000436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s01723p00004890

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00215880 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.07 OrthoFinder output from all 47 species
AT5G20940 No alias Glycosyl hydrolase family protein 0.02 OrthoFinder output from all 47 species
Aop_g10747 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g03870.1 LOC_Os02g03870 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
MA_8303127g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Msp_g13354 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29758 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g015560.4.1 Solyc04g015560 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Zm00001e012037_P001 Zm00001e012037 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 14 200
No external refs found!