Aliases : EIF4A-2
Description : mRNA unwinding factor *(eIF4A)) & original description: none
Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00036p00181640 | EIF4A-2,... | Protein biosynthesis.translation initiation.mRNA... | 0.03 | OrthoFinder output from all 47 species | |
Als_g13754 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g01779 | EIF4A-III | helicase component *(eIF4A3) of RNA quality control Exon... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g20199 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.21G079100.1 | EIF4A-2, Ceric.21G079100 | mRNA unwinding factor *(eIF4A)) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Cre06.g298650 | EIF4A-2 | Protein biosynthesis.translation initiation.mRNA... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g03759 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01015173001 | EIF4A-2 | Protein biosynthesis.translation initiation.mRNA... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g04610 | No alias | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g23612 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Mp2g02760.1 | EIF4A-2 | mRNA unwinding factor (eIF4A) | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g15136 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pp3c6_1080V3.1 | EIF4A-2, Pp3c6_1080 | eukaryotic translation initiation factor 4A1 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000625 | EIF4A-2 | not classified & original description: CDS=1-921 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g48579 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g062800.4.1 | EIF4A-2, Solyc06g062800 | mRNA unwinding factor (eIF4A) | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g062800.3.1 | EIF4A-2, Solyc08g062800 | mRNA unwinding factor (eIF4A) | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g095990.2.1 | EIF4A-2, Solyc12g095990 | mRNA unwinding factor (eIF4A) | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g096000.2.1 | EIF4A-2, Solyc12g096000 | mRNA unwinding factor (eIF4A) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g24980 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g27327 | EIF4A-2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g03932 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e013175_P002 | EIF4A-2, Zm00001e013175 | mRNA unwinding factor (eIF4A) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e013648_P002 | EIF4A-2, Zm00001e013648 | mRNA unwinding factor (eIF4A) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023523_P001 | EIF4A-III, Zm00001e023523 | helicase component eIF4A3 of RNA quality control Exon... | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044093 | positive regulation of molecular function | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
BP | GO:0110154 | RNA decapping | IEP | HCCA |
BP | GO:0110156 | methylguanosine-cap decapping | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |