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  5. AMTR_s00209p00025840

AMTR_s00209p00025840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00209.6

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00209p00025840
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00115550 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.05 OrthoFinder output from all 47 species
AT4G23820 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Cba_g05171 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.37G027000.1 Ceric.37G027000 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g07611 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04774 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49091 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10358 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04524 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10961 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g081480.3.1 Solyc08g081480 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Solyc08g082170.4.1 Solyc08g082170 Probable polygalacturonase OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
Solyc09g075460.3.1 Solyc09g075460 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Tin_g11741 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 182 462
No external refs found!