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  5. AMTR_s00202p00021010

AMTR_s00202p00021010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00202.6

Description : BTB/POZ domain-containing protein At4g08455 OS=Arabidopsis thaliana


Gene families : OG0000697 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000697_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00202p00021010
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Adi_g009637 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g02109 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dde_g04759 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
LOC_Os11g41350.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.02 OrthoFinder output from all 47 species
Mp1g13890.1 No alias BTB/POZ domain-containing protein At3g56230... 0.02 OrthoFinder output from all 47 species
Mp6g09780.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp7g11260.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012171 No alias not classified & original description: CDS=1-513 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013143 No alias not classified & original description: CDS=1-1056 0.02 OrthoFinder output from all 47 species
Spa_g00727 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!