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  5. AMTR_s00185p00047700

AMTR_s00185p00047700 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00185.19

Description : RNA processing.RNA modification.dihydrouridylation.tRNA dihydrouridine synthase


Gene families : OG0004183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004183_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00185p00047700

Target Alias Description ECC score Gene Family Method Actions
Cre04.g229948 No alias RNA processing.RNA modification.dihydrouridylation.tRNA... 0.01 OrthoFinder output from all 47 species
GSVIVT01024158001 No alias RNA processing.RNA modification.dihydrouridylation.tRNA... 0.03 OrthoFinder output from all 47 species
LOC_Os04g02730.1 LOC_Os04g02730 tRNA dihydrouridine synthase 0.02 OrthoFinder output from all 47 species
Smo409324 No alias tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEA Interproscan
MF GO:0017150 tRNA dihydrouridine synthase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001269 DUS_fam 434 611
No external refs found!