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  5. AMTR_s00182p00026140

AMTR_s00182p00026140 (ADC2, SPE2, ATADC2,...)


Aliases : ADC2, SPE2, ATADC2, evm_27.TU.AmTr_v1.0_scaffold00182.8

Description : Polyamine metabolism.putrescine.synthesis.plastidial/nuclear pathway.arginine decarboxylase


Gene families : OG0001452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00182p00026140

Target Alias Description ECC score Gene Family Method Actions
Als_g56138 ADC1, ARGDC, ARGDC1, SPE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57606.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64047.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69293.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001110 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: CDS=1-2103 0.01 OrthoFinder output from all 47 species
Azfi_s0073.g037089 ADC1, ARGDC, ARGDC1, SPE1 EC_4.1 carbon-carbon lyase & original description: CDS=1-1959 0.03 OrthoFinder output from all 47 species
Ceric.1Z147000.1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g04276 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08893 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40129 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04009 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13215 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024167001 ADC1, ARGDC, ARGDC1, SPE1 Polyamine... 0.04 OrthoFinder output from all 47 species
LOC_Os06g04070.1 ADC2, SPE2,... arginine decarboxylase 0.04 OrthoFinder output from all 47 species
Len_g13321 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03336 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
MA_8291837g0010 ADC1, ARGDC, ARGDC1, SPE1 arginine decarboxylase 0.03 OrthoFinder output from all 47 species
Nbi_g01193 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33380 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58596 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25136 ADC1, ARGDC, ARGDC1, SPE1 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30080 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g054440.3.1 ADC2, SPE2,... arginine decarboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR022644 De-COase2_N 153 413
IPR022643 De-COase2_C 490 611
No external refs found!