AMTR_s00178p00018030 (KCS12,...)

Aliases : KCS12, evm_27.TU.AmTr_v1.0_scaffold00178.1

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase

Gene families : OG0012186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012186_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00178p00018030
Cluster	HCCA: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00034p00045070	KCS12,...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.07	OrthoFinder output from all 47 species
AT1G07720	KCS3	3-ketoacyl-CoA synthase 3	0.05	OrthoFinder output from all 47 species
AT5G04530	KCS19	3-ketoacyl-CoA synthase 19	0.03	OrthoFinder output from all 47 species
GSVIVT01005975001	KCS12	Lipid metabolism.fatty acid synthesis.fatty acid...	0.06	OrthoFinder output from all 47 species
LOC_Os03g26530.1	KCS12, LOC_Os03g26530	3-ketoacyl-CoA synthase (KCS)	0.05	OrthoFinder output from all 47 species
LOC_Os03g26620.1	KCS19, LOC_Os03g26620	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
LOC_Os10g33370.1	KCS12, LOC_Os10g33370	3-ketoacyl-CoA synthase (KCS)	0.05	OrthoFinder output from all 47 species
Solyc11g072990.1.1	KCS3, Solyc11g072990	3-ketoacyl-CoA synthase (KCS)	0.06	OrthoFinder output from all 47 species
Zm00001e001847_P001	KCS12, Zm00001e001847	3-ketoacyl-CoA synthase (KCS)	0.05	OrthoFinder output from all 47 species
Zm00001e004603_P002	KCS12, Zm00001e004603	3-ketoacyl-CoA synthase (KCS)	0.08	OrthoFinder output from all 47 species
Zm00001e016197_P001	KCS12, Zm00001e016197	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	36	317
IPR013747	ACP_syn_III_C	336	417

External Links

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AMTR_s00178p00018030 (KCS12,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation