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  5. AMTR_s00175p00032740

AMTR_s00175p00032740 (BGAL8,...)


Aliases : BGAL8, evm_27.TU.AmTr_v1.0_scaffold00175.8

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase


Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00175p00032740

Target Alias Description ECC score Gene Family Method Actions
AT2G28470 BGAL8 beta-galactosidase 8 0.04 OrthoFinder output from all 47 species
Ala_g27476 BGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28359.t1 BGAL8, Aspi01Gene28359 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59928.t1 BGAL8, Aspi01Gene59928 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72344.t1 BGAL9, Aspi01Gene72344 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12016 BGAL1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16960 BGAL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005849001 BGAL8 Beta-galactosidase 6 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
GSVIVT01018853001 BGAL3 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01025170001 BGAL8 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
LOC_Os02g12730.1 BGAL1, LOC_Os02g12730 beta-galactosidase (BGAL) 0.05 OrthoFinder output from all 47 species
LOC_Os03g06940.1 BGAL3, LOC_Os03g06940 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Len_g29854 BGAL8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436863g0010 BGAL10 Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_168609g0010 BGAL12 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
MA_665188g0010 BGAL8 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Msp_g24966 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39086 BGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25743 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02223 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000496_P002 BGAL3, Zm00001e000496 beta-galactosidase (BGAL) 0.05 OrthoFinder output from all 47 species
Zm00001e020528_P001 BGAL1, Zm00001e020528 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Zm00001e039014_P001 BGAL3, Zm00001e039014 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR001944 Glycoside_Hdrlase_35 60 364
IPR000922 Lectin_gal-bd_dom 804 881
No external refs found!