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  5. AMTR_s00174p00064310

AMTR_s00174p00064310 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00174.32

Description : Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00174p00064310
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00075540 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G79130 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT2G18010 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
AT2G28085 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
Aspi01Gene09107.t1 Aspi01Gene09107 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09781.t1 Aspi01Gene09781 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09782.t1 Aspi01Gene09782 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14026.t1 Aspi01Gene14026 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45399.t1 Aspi01Gene45399 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os12g43110.1 LOC_Os12g43110 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g03798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_105570g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_170671g0030 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_95364g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g27638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g110790.3.1 Solyc01g110790 Auxin-induced protein 15A OS=Glycine max... 0.04 OrthoFinder output from all 47 species
Solyc01g110900.1.1 Solyc01g110900 Indole-3-acetic acid-induced protein ARG7 OS=Vigna... 0.03 OrthoFinder output from all 47 species
Solyc01g110903.1.1 Solyc01g110903 Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g053000.1.1 Solyc04g053000 Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g074950.1.1 Solyc06g074950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g089270.1.1 Solyc12g089270 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g05488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023802_P001 Zm00001e023802 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 45 131
No external refs found!