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  5. AMTR_s00171p00055120

AMTR_s00171p00055120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00171.38

Description : Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:monovalent cation antiporter (CHX-type)


Gene families : OG0000230 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000230_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00171p00055120
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT4G23700 CHX17, ATCHX17 cation/H+ exchanger 17 0.02 OrthoFinder output from all 47 species
AT5G58460 CHX25, ATCHX25 cation/H+ exchanger 25 0.03 OrthoFinder output from all 47 species
Adi_g019088 ATCHX20, CHX20 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Aev_g11345 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.04 OrthoFinder output from all 47 species
Aop_g27459 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.04 OrthoFinder output from all 47 species
Aop_g68448 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Ceric.03G083000.1 ATCHX18, CHX18,... proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Dac_g22934 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os05g39600.1 CHX15, ATCHX15,... proton:monovalent cation antiporter (CHX) 0.01 OrthoFinder output from all 47 species
LOC_Os09g37300.1 CHX15, ATCHX15,... proton:monovalent cation antiporter (CHX) 0.01 OrthoFinder output from all 47 species
Len_g34348 CHX24, ATCHX24 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g05109 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Sam_g46420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g021410.4.1 CHX15, ATCHX15,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Solyc08g081820.4.1 ATCHX18, CHX18,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Tin_g27585 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e017895_P001 chx28, Zm00001e017895 proton:monovalent cation antiporter (CHX) 0.03 OrthoFinder output from all 47 species
Zm00001e028867_P001 CHX15, ATCHX15,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEA Interproscan
MF GO:0015299 obsolete solute:proton antiporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 51 430
No external refs found!