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  5. AMTR_s00170p00062530

AMTR_s00170p00062530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00170.30

No description available


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00170p00062530
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT3G43230 No alias RING/FYVE/PHD-type zinc finger family protein 0.04 OrthoFinder output from all 47 species
GSVIVT01015009001 No alias No description available 0.05 OrthoFinder output from all 47 species
Mp3g11370.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g10419 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Msp_g11153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02209 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ore_g05728 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Pnu_g03822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo175464 No alias No description available 0.03 OrthoFinder output from all 47 species
Zm00001e033254_P004 Zm00001e033254 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 165 231
IPR007461 Ysc84_actin-binding 348 469
No external refs found!