AMTR_s00156p00023720 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00156.6

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycosylation.AGP beta-1,3-galactosyltransferase

Gene families : OG0000384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00156p00023720
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00084p00079370	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.hydroxyproline-rich...	0.03	OrthoFinder output from all 47 species
Aev_g13844	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Als_g39616	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g47313	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.03	OrthoFinder output from all 47 species
Aop_g05073	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Aop_g05179	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene30256.t2	Aspi01Gene30256	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.19G068100.1	Ceric.19G068100	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Dde_g04327	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Dde_g10764	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g02582	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01008948001	No alias	Cell wall.cell wall proteins.hydroxyproline-rich...	0.03	OrthoFinder output from all 47 species
Lfl_g40245	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g24861	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.03	OrthoFinder output from all 47 species
Ore_g41871	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g17834	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Spa_g13110	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Tin_g06533	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.03	OrthoFinder output from all 47 species
Tin_g24594	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e025169_P001	Zm00001e025169	AGP beta-1,3-galactosyltransferase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006486	protein glycosylation	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008378	galactosyltransferase activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025298	DUF4094	10	102
IPR002659	Glyco_trans_31	141	338

External Links

No external refs found!

AMTR_s00156p00023720 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation