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  5. AMTR_s00155p00077490

AMTR_s00155p00077490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00155.50

No description available


Gene families : OG0001489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00155p00077490

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0087.g042226 No alias not classified & original description: CDS=511-3351 0.03 OrthoFinder output from all 47 species
Dcu_g11195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g40340.1 LOC_Os01g40340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g51490.1 LOC_Os05g51490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435320g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g21329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020382 No alias not classified & original description: CDS=450-2900 0.02 OrthoFinder output from all 47 species
Solyc06g075160.3.1 Solyc06g075160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g03491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR007587 SAPS 131 349
IPR007587 SAPS 355 490
No external refs found!