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  5. AMTR_s00154p00064240

AMTR_s00154p00064240 (YSL6,...)


Aliases : YSL6, evm_27.TU.AmTr_v1.0_scaffold00154.40

Description : Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00064240
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00229620 YSL6,... Nutrient uptake.iron uptake.chelation-based strategy... 0.04 OrthoFinder output from all 47 species
AMTR_s00103p00133560 ATYSL3, YSL3,... Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00064550 YSL7,... Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.03 OrthoFinder output from all 47 species
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.03 OrthoFinder output from all 47 species
AT5G24380 ATYSL2, YSL2 YELLOW STRIPE like 2 0.02 OrthoFinder output from all 47 species
Adi_g044334 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Als_g03162 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Als_g28455 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Als_g43225 YSL7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g71362 ATYSL1, YSL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03882.t1 YSL6, Aspi01Gene03882 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29925.t1 YSL6, Aspi01Gene29925 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29925.t4 YSL6, Aspi01Gene29925 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene52304.t2 YSL7, Aspi01Gene52304 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55143.t1 YSL6, Aspi01Gene55143 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g09786 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01012036001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.02 OrthoFinder output from all 47 species
GSVIVT01019646001 ATYSL1, YSL1 Nutrient uptake.iron uptake.chelation-based strategy... 0.04 OrthoFinder output from all 47 species
GSVIVT01029349001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.04 OrthoFinder output from all 47 species
Gb_27981 ATYSL3, YSL3 iron chelator transporter (YSL). ferric cation-chelator... 0.04 OrthoFinder output from all 47 species
Gb_41263 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.08 OrthoFinder output from all 47 species
LOC_Os04g44300.1 YSL7, LOC_Os04g44300 iron chelator transporter (YSL). ferric cation-chelator... 0.04 OrthoFinder output from all 47 species
LOC_Os04g45900.1 ATYSL2, YSL2,... iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Len_g12937 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
MA_10431747g0010 YSL7 Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.02 OrthoFinder output from all 47 species
MA_110581g0010 ATYSL3, YSL3 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
MA_508161g0010 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.04 OrthoFinder output from all 47 species
MA_924600g0010 YSL6 Probable metal-nicotianamine transporter YSL6... 0.05 OrthoFinder output from all 47 species
MA_9934g0010 YSL6 iron chelator transporter (YSL) 0.03 OrthoFinder output from all 47 species
Msp_g09049 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g08018 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g40521 YSL7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g42346 YSL6 iron chelator transporter *(YSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25773 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Pir_g52006 YSL6 iron chelator transporter *(YSL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52008 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Pp3c2_34990V3.1 YSL6, Pp3c2_34990 YELLOW STRIPE like 6 0.03 OrthoFinder output from all 47 species
Sam_g22236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g031920.3.1 YSL7, Solyc03g031920 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Spa_g14612 YSL7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26130 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g45079 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Tin_g15178 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e015280_P004 ATYSL3, YSL3,... iron chelator transporter (YSL). ferric cation-chelator... 0.01 OrthoFinder output from all 47 species
Zm00001e015283_P001 ATYSL3, YSL3,... iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e023053_P001 YSL7, Zm00001e023053 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e026901_P002 YSL7, Zm00001e026901 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 34 84
IPR004813 OPT 94 190
No external refs found!