1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00150p00063670

AMTR_s00150p00063670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00150.24

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.PPPDE-type peptidase


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00150p00063670

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene48898.t1 Aspi01Gene48898 deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431115g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g07751 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038787_P002 Zm00001e038787 peptidase (PPPDE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 17 148
No external refs found!