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  5. AMTR_s00149p00102010

AMTR_s00149p00102010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00149.85

No description available


Gene families : OG0001249 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00149p00102010

Target Alias Description ECC score Gene Family Method Actions
AT3G02890 No alias RING/FYVE/PHD zinc finger superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G16680 No alias RING/FYVE/PHD zinc finger superfamily protein 0.08 OrthoFinder output from all 47 species
Aev_g02613 No alias regulatory component *(AIPP2) of chromatin silencing... 0.02 OrthoFinder output from all 47 species
Ala_g11357 No alias regulatory component *(AIPP2) of chromatin silencing... 0.05 OrthoFinder output from all 47 species
Ala_g26817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01217 No alias regulatory component *(AIPP2) of chromatin silencing... 0.04 OrthoFinder output from all 47 species
Aob_g12429 No alias regulatory component *(AIPP2) of chromatin silencing... 0.06 OrthoFinder output from all 47 species
Aob_g41453 No alias regulatory component *(AIPP2) of chromatin silencing... 0.05 OrthoFinder output from all 47 species
Aop_g33239 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24234.t1 Aspi01Gene24234 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0080.g038469 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
Ceric.07G096800.1 Ceric.07G096800 regulatory component *(AIPP2) of chromatin silencing... 0.04 OrthoFinder output from all 47 species
Ceric.09G080200.1 Ceric.09G080200 regulatory component *(AIPP2) of chromatin silencing... 0.08 OrthoFinder output from all 47 species
Ceric.1Z032800.1 Ceric.1Z032800 not classified & original description: pacid=50637014... 0.02 OrthoFinder output from all 47 species
Dac_g14673 No alias regulatory component *(AIPP2) of chromatin silencing... 0.02 OrthoFinder output from all 47 species
Dcu_g08331 No alias regulatory component *(AIPP2) of chromatin silencing... 0.08 OrthoFinder output from all 47 species
Ehy_g08700 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
GSVIVT01024330001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_18601 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_40677 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g42196.1 LOC_Os10g42196 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g18770.1 LOC_Os11g18770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g06464.1 LOC_Os12g06464 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g24540.1 LOC_Os12g24540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g35705 No alias regulatory component *(AIPP2) of chromatin silencing... 0.06 OrthoFinder output from all 47 species
Lfl_g17806 No alias regulatory component *(AIPP2) of chromatin silencing... 0.05 OrthoFinder output from all 47 species
MA_106351g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_62806g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g14570.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g15478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25774 No alias regulatory component *(AIPP2) of chromatin silencing... 0.02 OrthoFinder output from all 47 species
Ore_g41526 No alias regulatory component *(AIPP2) of chromatin silencing... 0.05 OrthoFinder output from all 47 species
Pnu_g24121 No alias component *(MED19) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Ppi_g32877 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020772 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
Sam_g36098 No alias regulatory component *(AIPP2) of chromatin silencing... 0.07 OrthoFinder output from all 47 species
Smo439529 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc04g070990.4.1 Solyc04g070990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g49012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49748 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
Tin_g12697 No alias regulatory component *(AIPP2) of chromaTin silencing... 0.03 OrthoFinder output from all 47 species
Zm00001e029823_P001 Zm00001e029823 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 426 473
No external refs found!