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  5. AMTR_s00148p00088930

AMTR_s00148p00088930 (ATPAL1, PAL1,...)


Aliases : ATPAL1, PAL1, evm_27.TU.AmTr_v1.0_scaffold00148.59

Description : Secondary metabolism.phenolics.p-coumaroyl-CoA synthesis.phenylalanine ammonia lyase (PAL)


Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00148p00088930

Target Alias Description ECC score Gene Family Method Actions
AT2G37040 ATPAL1, PAL1 PHE ammonia lyase 1 0.07 OrthoFinder output from all 47 species
AT3G53260 ATPAL2, PAL2 phenylalanine ammonia-lyase 2 0.06 OrthoFinder output from all 47 species
Adi_g018720 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059368 ATPAL1, PAL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g084112 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01488 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30887 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g37142 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38575 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62284 ATPAL1, PAL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07268 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11634 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14595 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23707 ATPAL2, PAL2 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05640.t1 PAL4, Aspi01Gene05640 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07514.t1 PAL4, Aspi01Gene07514 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18088.t1 ATPAL1, PAL1,... EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18089.t1 ATPAL1, PAL1,... EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20030.t1 PAL4, Aspi01Gene20030 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23282.t1 PAL4, Aspi01Gene23282 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043679 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2310 0.04 OrthoFinder output from all 47 species
Cba_g03360 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04033 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g28767 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.14G035000.1 PAL4, Ceric.14G035000 EC_4.3 carbon-nitrogen lyase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.1Z056200.1 PAL4, Ceric.1Z056200 EC_4.3 carbon-nitrogen lyase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.28G008000.1 PAL4, Ceric.28G008000 EC_4.3 carbon-nitrogen lyase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.28G008100.1 PAL4, Ceric.28G008100 EC_4.3 carbon-nitrogen lyase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g08062 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14924 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23175 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27041 ATPAL2, PAL2 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40579 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01768 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08202 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24302 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33771 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17566 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g25081 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26544 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g03929 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04952 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015123001 PAL4 Phenylalanine ammonia-lyase OS=Pinus taeda 0.04 OrthoFinder output from all 47 species
GSVIVT01015124001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 OrthoFinder output from all 47 species
GSVIVT01015138001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01016257001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.07 OrthoFinder output from all 47 species
GSVIVT01025214001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.07 OrthoFinder output from all 47 species
GSVIVT01025703001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 OrthoFinder output from all 47 species
Gb_10949 PAL4 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Gb_16672 ATPAL1, PAL1 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
LOC_Os02g41630.2 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
LOC_Os02g41650.3 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.05 OrthoFinder output from all 47 species
LOC_Os02g41670.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.06 OrthoFinder output from all 47 species
LOC_Os02g41680.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
LOC_Os04g43760.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
LOC_Os04g43800.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
LOC_Os05g35290.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
Len_g30539 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50108 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14564 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
MA_10429279g0010 PAL4 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
MA_123220g0010 ATPAL2, PAL2 phenylalanine ammonia lyase (PAL) 0.07 OrthoFinder output from all 47 species
MA_189052g0010 ATPAL1, PAL1 Phenylalanine ammonia-lyase OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
MA_44561g0010 PAL4 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Mp1g10150.1 PAL4 phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Mp4g14110.1 ATPAL1, PAL1 phenylalanine ammonia lyase (PAL) 0.05 OrthoFinder output from all 47 species
Mp4g14130.1 ATPAL2, PAL2 Phenylalanine ammonia-lyase class 1 (Fragment)... 0.04 OrthoFinder output from all 47 species
Mp4g14140.1 ATPAL1, PAL1 phenylalanine ammonia lyase (PAL) 0.05 OrthoFinder output from all 47 species
Mp4g14160.1 ATPAL2, PAL2 phenylalanine ammonia lyase (PAL) 0.06 OrthoFinder output from all 47 species
Mp4g14170.1 PAL4 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Mp7g14880.1 ATPAL1, PAL1 phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
Msp_g28220 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29412 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33722 ATPAL1, PAL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08621 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10582 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16429 ATPAL2, PAL2 EC_4.3 carbon-nitrogen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25845 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40543 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40658 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18585 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19939 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26446 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24885 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08363 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g056170.3.1 ATPAL2, PAL2,... phenylalanine ammonia lyase (PAL) 0.1 OrthoFinder output from all 47 species
Solyc09g007910.4.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.09 OrthoFinder output from all 47 species
Solyc09g007920.4.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
Solyc10g011920.3.1 ATPAL1, PAL1,... Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... 0.03 OrthoFinder output from all 47 species
Solyc10g011930.1.1 ATPAL1, PAL1,... Phenylalanine ammonia-lyase OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc10g086180.2.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.07 OrthoFinder output from all 47 species
Spa_g08001 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16564 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26458 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g03458 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14732 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007572_P001 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
Zm00001e015155_P001 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.06 OrthoFinder output from all 47 species
Zm00001e015157_P001 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
Zm00001e023032_P002 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016841 ammonia-lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 52 543
No external refs found!