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  5. AMTR_s00147p00104660

AMTR_s00147p00104660 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00147.61

No description available


Gene families : OG0001730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00147p00104660
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT1G53800 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Als_g52618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010108 No alias not classified & original description: CDS=68-1096 0.04 OrthoFinder output from all 47 species
Azfi_s0066.g036090 No alias not classified & original description: CDS=173-1813 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065792 No alias not classified & original description: CDS=123-1853 0.1 OrthoFinder output from all 47 species
Cba_g59611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g60241 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g71907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G079500.1 Ceric.21G079500 not classified & original description: pacid=50604458... 0.03 OrthoFinder output from all 47 species
Ceric.24G059100.1 Ceric.24G059100 not classified & original description: pacid=50628706... 0.03 OrthoFinder output from all 47 species
Dde_g06597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014224001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01016660001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_18962 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_24726 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g12354.1 LOC_Os10g12354 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g29045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_453783g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_643462g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g14930.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001251 No alias not classified & original description: CDS=64-1719 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004029 No alias not classified & original description: CDS=212-1411 0.02 OrthoFinder output from all 47 species
Sam_g28963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g123700.4.1 Solyc03g123700 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc12g014220.3.1 Solyc12g014220 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g28999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006550_P001 Zm00001e006550 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e032593_P001 Zm00001e032593 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
MF GO:0005343 organic acid:sodium symporter activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0008508 bile acid:sodium symporter activity IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015125 bile acid transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP HCCA
MF GO:0015370 solute:sodium symporter activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140161 monocarboxylate:sodium symporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003611 NUMOD3 60 89
No external refs found!