Sequence Description Alias PCC hrr AMTR_s00046p00228230 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL13 component emb1473, evm_27.TU.AmTr_v1.0_scaffold00046.169 0.9574167899905728 4 AMTR_s00044p00032580 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP4/FSD3 component FSD3, evm_27.TU.AmTr_v1.0_scaffold00044.9 0.9560481706863396 3 AMTR_s00059p00121300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll b reductase complex.NOL component NOL, evm_27.TU.AmTr_v1.0_scaffold00059.95 0.9371860521746426 3 AMTR_s00176p00057350 Solute transport.primary active transport.P-type ATPase superfamily.P1 family.HMA P1B-type heavy metal cation-transporting ATPase PAA1, HMA6, evm_27.TU.AmTr_v1.0_scaffold00176.30 0.9351253072820893 4 AMTR_s00057p00182130 Acyl-CoA-binding domain-containing protein 6 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00057.193 0.9277601008673712 9 AMTR_s00032p00091590 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase HEMC, evm_27.TU.AmTr_v1.0_scaffold00032.57 0.9240319649754191 6 AMTR_s00012p00255170 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00012.285 0.9198361386137209 7 AMTR_s00009p00241540 RNA processing.organelle machineries.ribonuclease activities.RNase J endoribonuclease emb2746, evm_27.TU.AmTr_v1.0_scaffold00009.218 0.9181540182116489 15 AMTR_s00122p00097060 Solute transport.carrier-mediated transport.BART superfamily.BASS family.BAT 2-keto acid transporter evm_27.TU.AmTr_v1.0_scaffold00122.40 0.9176276742097536 20 AMTR_s00040p00213060 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic100 component emb1211, evm_27.TU.AmTr_v1.0_scaffold00040.228 0.9157521161186716 52 AMTR_s00052p00157970 evm_27.TU.AmTr_v1.0_scaffold00052.66 0.913085541614068 24 AMTR_s00109p00045690 Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.32 0.909974429007274 35 AMTR_s00028p00245370 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.CFM2-type splicing factor ATCFM2, CFM2, evm_27.TU.AmTr_v1.0_scaffold00028.138 0.9072693678339069 54 AMTR_s00053p00090700 Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00053.47 0.9066792709403655 14 AMTR_s00106p00119930 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein CPN60B, LEN1, evm_27.TU.AmTr_v1.0_scaffold00106.91 0.9038972661167344 15 AMTR_s00061p00142700 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CP31 RNA editing factor ATRBP31, CP31, ATRBP33, RBP31, evm_27.TU.AmTr_v1.0_scaffold00061.123 0.9035104958036706 23 AMTR_s00013p00241300 evm_27.TU.AmTr_v1.0_scaffold00013.201 0.9030622983346259 20 AMTR_s00004p00143390 Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase EMB2247, evm_27.TU.AmTr_v1.0_scaffold00004.140 0.9027570352820602 57 AMTR_s00175p00056960 Solute transport.carrier-mediated transport.APC superfamily.HAAAP-type aromatic amino acid transporter evm_27.TU.AmTr_v1.0_scaffold00175.29 0.9004640938354792 19 AMTR_s00063p00074060 evm_27.TU.AmTr_v1.0_scaffold00063.7 0.8967665654421461 21 AMTR_s00053p00152680 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component V157, PDE166, ALB1, CHLD, ALB-1V, evm_27.TU.AmTr_v1.0_scaffold00053.100 0.8966574511085897 37 AMTR_s00003p00257280 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00003.320 0.8955348415963201 84 AMTR_s00010p00055110 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psPSRP3 component evm_27.TU.AmTr_v1.0_scaffold00010.27 0.8950649370632199 48 AMTR_s00085p00102880 Disease resistance protein RPM1 OS=Arabidopsis thaliana RPP13, evm_27.TU.AmTr_v1.0_scaffold00085.63 0.8932527187001162 29 AMTR_s00022p00249930 emb2738, evm_27.TU.AmTr_v1.0_scaffold00022.381 0.8917499688688559 72 AMTR_s00114p00128980 evm_27.TU.AmTr_v1.0_scaffold00114.59 0.8901057241152561 72 AMTR_s00011p00258380 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1, evm_27.TU.AmTr_v1.0_scaffold00011.182 0.8895139985778707 31 AMTR_s00018p00168540 DNA mismatch repair protein MSH1, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00018.94 0.8894456080094005 61 AMTR_s00071p00072250 Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.42 0.8883259776470972 84 AMTR_s00062p00065360 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LCNP NPQ-regulator lipocalin CHL, evm_27.TU.AmTr_v1.0_scaffold00062.38 0.8866962530703406 34 AMTR_s00160p00027870 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS5 component evm_27.TU.AmTr_v1.0_scaffold00160.6 0.8820778818827403 35 AMTR_s00067p00113950 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC5 component PTAC5, evm_27.TU.AmTr_v1.0_scaffold00067.91 0.8820103737424182 36 AMTR_s00012p00224800 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter ATPDR3, PDR3, evm_27.TU.AmTr_v1.0_scaffold00012.174 0.8815540915856699 63 AMTR_s00038p00234220 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.234 0.8811762598196757 58 AMTR_s00013p00233820 evm_27.TU.AmTr_v1.0_scaffold00013.185 0.8810805168148453 53 AMTR_s00023p00031940 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.SLP phosphatase evm_27.TU.AmTr_v1.0_scaffold00023.9 0.8794646331485313 43 AMTR_s00023p00012750 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metal-citrate complex transporter (FRD-type) evm_27.TU.AmTr_v1.0_scaffold00023.3 0.8785192297310617 77 AMTR_s00032p00129870 evm_27.TU.AmTr_v1.0_scaffold00032.88 0.8777787756196685 45 AMTR_s00002p00244810 RNA processing.RNA modification.pseudouridylation.Pus10-type tRNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00002.325 0.8764686770344612 68 AMTR_s00120p00054610 evm_27.TU.AmTr_v1.0_scaffold00120.17 0.8763916741591701 76 AMTR_s00100p00087410 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris evm_27.TU.AmTr_v1.0_scaffold00100.26 0.8732611981691156 50 AMTR_s00066p00064700 evm_27.TU.AmTr_v1.0_scaffold00066.42 0.8730706960054523 61 AMTR_s00077p00031710 Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.15 0.8730629658775892 52 AMTR_s00005p00268350 Heavy metal-associated isoprenylated plant protein 37 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00005.242 0.8726480683088378 55 AMTR_s00008p00202090 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00008.120 0.8708928748056244 87 AMTR_s00066p00184560 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor ATPRFB, HCF109, evm_27.TU.AmTr_v1.0_scaffold00066.232 0.8701819738280733 88 AMTR_s00058p00115380 WEB family protein At5g55860 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.73 0.8699848968387592 60 AMTR_s00010p00259680 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP8, DEG8, evm_27.TU.AmTr_v1.0_scaffold00010.427 0.8690341851826955 62 AMTR_s00121p00121190 Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana EMB2758, evm_27.TU.AmTr_v1.0_scaffold00121.30 0.8676675291470906 63 AMTR_s00044p00072150 Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.43 0.8672157989234748 64 AMTR_s00025p00106480 Protein modification.phosphorylation.TKL kinase superfamily.Extensin kinase evm_27.TU.AmTr_v1.0_scaffold00025.89 0.8644489131836388 69 AMTR_s00065p00129700 Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase evm_27.TU.AmTr_v1.0_scaffold00065.84 0.864315524487652 70 AMTR_s00016p00225920 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst ATCYP20-2, CYP20-2, evm_27.TU.AmTr_v1.0_scaffold00016.208 0.8635326331775621 72 AMTR_s00133p00054340 PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.19 0.8631347685364557 73 AMTR_s00029p00083110 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein HCF136, evm_27.TU.AmTr_v1.0_scaffold00029.76 0.8629764814415191 74 AMTR_s00109p00050280 Protein modification.peptide maturation.plastid.PLSP/TPP plastidic signal peptidase PLSP1, evm_27.TU.AmTr_v1.0_scaffold00109.36 0.8628429812326764 77 AMTR_s00013p00039290 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL27 component RPL27, evm_27.TU.AmTr_v1.0_scaffold00013.7 0.8621832988618282 81 AMTR_s00051p00099980 Protein modification.phosphorylation.TKL kinase superfamily.MLK kinase families.MLK-PP2C kinase evm_27.TU.AmTr_v1.0_scaffold00051.41 0.8621454451390212 82 AMTR_s00039p00213540 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psPSRP5 component PSRP5, evm_27.TU.AmTr_v1.0_scaffold00039.184 0.8588617537930666 86 AMTR_s00002p00252090 Pentatricopeptide repeat-containing protein At1g32415, mitochondrial OS=Arabidopsis thaliana 0.8581268176066497 87 AMTR_s00024p00252900 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.MPH2 acclimation factor evm_27.TU.AmTr_v1.0_scaffold00024.352 0.8567320841741567 90 AMTR_s00005p00262740 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter ATTAP1, TAP1, evm_27.TU.AmTr_v1.0_scaffold00005.211 0.8563884166510914 94 AMTR_s00012p00255190 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00012.286 0.8555110791033537 95 AMTR_s00175p00032740 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase BGAL8, evm_27.TU.AmTr_v1.0_scaffold00175.8 0.8553694667686144 97