AMTR_s00147p00031120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00147.10

No description available


Gene families : OG0003996 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003996_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00147p00031120
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00113710 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aop_g40748 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08240.t1 Aspi01Gene08240 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.04G015200.1 Ceric.04G015200 not classified & original description: pacid=50632542... 0.04 OrthoFinder output from all 47 species
Ceric.09G042400.1 Ceric.09G042400 not classified & original description: pacid=50586660... 0.04 OrthoFinder output from all 47 species
Ceric.09G042500.1 Ceric.09G042500 not classified & original description: pacid=50588487... 0.02 OrthoFinder output from all 47 species
Ceric.36G060300.1 Ceric.36G060300 not classified & original description: pacid=50567960... 0.08 OrthoFinder output from all 47 species
Dcu_g15564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g09011 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_02103 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49960.1 LOC_Os05g49960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_141021g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_184149g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g22907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g52613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g009770.1.1 Solyc06g009770 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g075570.1.1 Solyc09g075570 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e026178_P001 Zm00001e026178 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e031454_P001 Zm00001e031454 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!