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  5. AMTR_s00145p00105880

AMTR_s00145p00105880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00145.43

Description : Protein yippee-like At3g11230 OS=Arabidopsis thaliana


Gene families : OG0000369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00145p00105880

Target Alias Description ECC score Gene Family Method Actions
Ala_g23069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre07.g355500 No alias Protein yippee-like At5g53940 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033969001 No alias Protein yippee-like OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018985 No alias not classified & original description: CDS=439-936 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR004910 Yippee/Mis18/Cereblon 1 106
No external refs found!