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  5. AMTR_s00144p00042270

AMTR_s00144p00042270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00144.17

Description : Solute transport.carrier-mediated transport.APC superfamily.APC family.amino acid transporter (LAT-type)


Gene families : OG0000891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00144p00042270

Target Alias Description ECC score Gene Family Method Actions
Aev_g21088 No alias amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17635 No alias amino acid transporter *(LAT) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_41826 No alias amino acid transporter (LAT) 0.04 OrthoFinder output from all 47 species
Lfl_g05487 No alias amino acid transporter *(LAT) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13671 No alias amino acid transporter *(LAT) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005247 No alias amino acid transporter *(LAT) & original description: CDS=1-1461 0.03 OrthoFinder output from all 47 species
Smo418809 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Smo431542 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!