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  5. AMTR_s00142p00104760

AMTR_s00142p00104760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00142.69

No description available


Gene families : OG0002847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002847_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00142p00104760

Target Alias Description ECC score Gene Family Method Actions
Aob_g15719 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.03 OrthoFinder output from all 47 species
Cre02.g073250 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g46980 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.03 OrthoFinder output from all 47 species
Mp4g01870.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g11843 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.02 OrthoFinder output from all 47 species
Ppi_g39270 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.02 OrthoFinder output from all 47 species
Solyc07g007850.2.1 Solyc07g007850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015093 ferrous iron transmembrane transporter activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003618 TFIIS_cen_dom 275 357
No external refs found!