Aliases : evm_27.TU.AmTr_v1.0_scaffold00142.4
Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit
Gene families : OG0002111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002111_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G79990 | No alias | structural molecules | 0.11 | OrthoFinder output from all 47 species | |
AT3G15980 | No alias | Coatomer, beta' subunit | 0.05 | OrthoFinder output from all 47 species | |
Adi_g015312 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g088099 | No alias | subunit beta2 of coat protein complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g13025 | No alias | subunit beta2 of coat protein complex & original... | 0.09 | OrthoFinder output from all 47 species | |
Ala_g02602 | No alias | subunit beta2 of coat protein complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Als_g04780 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Als_g23306 | No alias | subunit beta2 of coat protein complex & original... | 0.05 | OrthoFinder output from all 47 species | |
Als_g23307 | No alias | subunit beta2 of coat protein complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g06720 | No alias | subunit beta2 of coat protein complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g12571 | No alias | subunit beta2 of coat protein complex & original... | 0.06 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000608 | No alias | subunit beta2 of coat protein complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Azfi_s0038.g026263 | No alias | subunit beta2 of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g14578 | No alias | subunit beta2 of coat protein complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g36928 | No alias | subunit beta2 of coat protein complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.30G060200.1 | Ceric.30G060200 | subunit beta2 of coat protein complex & original... | 0.09 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020903.33 | No alias | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.06 | OrthoFinder output from all 47 species | |
Cre02.g118500 | No alias | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.08 | OrthoFinder output from all 47 species | |
Dac_g05778 | No alias | subunit beta2 of coat protein complex & original... | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g04083 | No alias | subunit beta2 of coat protein complex & original... | 0.13 | OrthoFinder output from all 47 species | |
Dde_g02366 | No alias | subunit beta2 of coat protein complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Ehy_g02910 | No alias | subunit beta2 of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g08641 | No alias | subunit beta2 of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017121001 | No alias | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.09 | OrthoFinder output from all 47 species | |
Gb_26317 | No alias | subunit beta2 of coat protein complex | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os02g11830.2 | LOC_Os02g11830 | subunit beta2 of coat protein complex | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os02g11840.1 | LOC_Os02g11840 | subunit beta2 of coat protein complex | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os06g05180.3 | LOC_Os06g05180 | Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica... | 0.08 | OrthoFinder output from all 47 species | |
Len_g12266 | No alias | subunit beta2 of coat protein complex & original... | 0.11 | OrthoFinder output from all 47 species | |
Len_g46090 | No alias | subunit beta2 of coat protein complex & original... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g05710 | No alias | subunit beta2 of coat protein complex & original... | 0.1 | OrthoFinder output from all 47 species | |
MA_10436677g0010 | No alias | Coatomer subunit beta-3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
MA_10436836g0020 | No alias | Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica... | 0.01 | OrthoFinder output from all 47 species | |
MA_10436968g0010 | No alias | peroxisomal polyamine oxidase (PAO2/3/4). subunit beta2... | 0.03 | OrthoFinder output from all 47 species | |
Mp3g04060.1 | No alias | subunit beta2 of coat protein complex | 0.11 | OrthoFinder output from all 47 species | |
Msp_g01672 | No alias | subunit beta2 of coat protein complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g07405 | No alias | subunit beta2 of coat protein complex & original... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g10228 | No alias | subunit beta2 of coat protein complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Pir_g14528 | No alias | subunit beta2 of coat protein complex & original... | 0.06 | OrthoFinder output from all 47 species | |
Ppi_g01343 | No alias | subunit beta2 of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0058.g014985 | No alias | subunit beta2 of coat protein complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g08319 | No alias | subunit beta2 of coat protein complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g120270.4.1 | Solyc03g120270 | subunit beta2 of coat protein complex | 0.12 | OrthoFinder output from all 47 species | |
Solyc06g066730.3.1 | Solyc06g066730 | subunit beta2 of coat protein complex | 0.1 | OrthoFinder output from all 47 species | |
Solyc12g043000.3.1 | Solyc12g043000 | subunit beta2 of coat protein complex | 0.11 | OrthoFinder output from all 47 species | |
Spa_g10496 | No alias | subunit beta2 of coat protein complex & original... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g17544 | No alias | subunit beta2 of coat protein complex & original... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g02168 | No alias | subunit beta2 of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014494_P001 | Zm00001e014494 | subunit beta2 of coat protein complex | 0.14 | OrthoFinder output from all 47 species | |
Zm00001e024969_P001 | Zm00001e024969 | subunit beta2 of coat protein complex | 0.14 | OrthoFinder output from all 47 species | |
Zm00001e030001_P002 | Zm00001e030001 | subunit beta2 of coat protein complex | 0.12 | OrthoFinder output from all 47 species | |
Zm00001e036524_P002 | Zm00001e036524 | subunit beta2 of coat protein complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005198 | structural molecule activity | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
BP | GO:0016192 | vesicle-mediated transport | IEA | Interproscan |
CC | GO:0030117 | membrane coat | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | HCCA |
MF | GO:0003779 | actin binding | IEP | HCCA |
MF | GO:0003872 | 6-phosphofructokinase activity | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0004221 | obsolete ubiquitin thiolesterase activity | IEP | HCCA |
MF | GO:0004576 | oligosaccharyl transferase activity | IEP | HCCA |
MF | GO:0004579 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
CC | GO:0005798 | Golgi-associated vesicle | IEP | HCCA |
CC | GO:0005945 | 6-phosphofructokinase complex | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006486 | protein glycosylation | IEP | HCCA |
BP | GO:0006487 | protein N-linked glycosylation | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008443 | phosphofructokinase activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
BP | GO:0018279 | protein N-linked glycosylation via asparagine | IEP | HCCA |
MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0022406 | membrane docking | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
CC | GO:0030118 | clathrin coat | IEP | HCCA |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030125 | clathrin vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | HCCA |
CC | GO:0030131 | clathrin adaptor complex | IEP | HCCA |
CC | GO:0030132 | clathrin coat of coated pit | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031410 | cytoplasmic vesicle | IEP | HCCA |
CC | GO:0031982 | vesicle | IEP | HCCA |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0048278 | vesicle docking | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0051640 | organelle localization | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
BP | GO:0070085 | glycosylation | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
CC | GO:0097708 | intracellular vesicle | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
BP | GO:0140029 | exocytic process | IEP | HCCA |
BP | GO:0140056 | organelle localization by membrane tethering | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
No external refs found! |