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  5. AMTR_s00141p00103540

AMTR_s00141p00103540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00141.39

No description available


Gene families : OG0003264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00141p00103540

Target Alias Description ECC score Gene Family Method Actions
AT1G80240 No alias Protein of unknown function, DUF642 0.03 OrthoFinder output from all 47 species
AT2G41800 No alias Protein of unknown function, DUF642 0.02 OrthoFinder output from all 47 species
AT2G41810 No alias Protein of unknown function, DUF642 0.05 OrthoFinder output from all 47 species
AT3G08030 No alias Protein of unknown function, DUF642 0.03 OrthoFinder output from all 47 species
AT4G32460 No alias Protein of unknown function, DUF642 0.02 OrthoFinder output from all 47 species
Aev_g39326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65554.t1 Aspi01Gene65554 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04470 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_14930 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g55190.1 LOC_Os01g55190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g59300.1 LOC_Os03g59300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g41740.1 LOC_Os04g41740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g04050.1 LOC_Os07g04050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g10620.1 LOC_Os07g10620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_169757g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_32863g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_54830g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_655783g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_770477g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g120040.3.1 Solyc03g120040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007713_P001 Zm00001e007713 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e007714_P001 Zm00001e007714 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013973_P001 Zm00001e013973 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019773_P002 Zm00001e019773 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e029029_P001 Zm00001e029029 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041141_P001 Zm00001e041141 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006946 DGR2-like_dom 59 371
No external refs found!