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  5. AMTR_s00141p00064150

AMTR_s00141p00064150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00141.16

Description : La-related protein 6A OS=Arabidopsis thaliana


Gene families : OG0002191 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002191_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00141p00064150

Target Alias Description ECC score Gene Family Method Actions
Als_g05714 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
Dac_g07935 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
GSVIVT01038251001 No alias La-related protein 6B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Msp_g24860 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Tin_g05630 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR006630 La_HTH 153 211
No external refs found!