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  5. AMTR_s00138p00105620

AMTR_s00138p00105620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00138.51

No description available


Gene families : OG0007994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007994_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00138p00105620
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT3G01360 No alias Family of unknown function (DUF716) 0.03 OrthoFinder output from all 47 species
Als_g05452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G099600.1 Ceric.02G099600 not classified & original description: pacid=50585950... 0.05 OrthoFinder output from all 47 species
Msp_g16579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006904 DUF716 115 250
No external refs found!