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  5. AMTR_s00137p00083250

AMTR_s00137p00083250 (QWRF2,...)


Aliases : QWRF2, evm_27.TU.AmTr_v1.0_scaffold00137.38

Description : Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).Augmin gamma-TuRC recruiting complex.AUG8 component


Gene families : OG0000808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00137p00083250
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT3G19570 SCO3, QWRF1 Family of unknown function (DUF566) 0.02 OrthoFinder output from all 47 species
Adi_g085046 QWRF8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11033 QWRF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06306 SCO3, QWRF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16226 QWRF2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47588 QWRF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19947 QWRF4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g50787 QWRF2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58202.t1 QWRF8, Aspi01Gene58202 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G061400.1 QWRF2, Ceric.37G061400 not classified & original description: pacid=50616607... 0.06 OrthoFinder output from all 47 species
Dcu_g04896 QWRF8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009361001 QWRF2 QWRF motif-containing protein 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_12261 QWRF4 QWRF motif-containing protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_12272 QWRF2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g34320.1 QWRF8, LOC_Os08g34320 AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g01376 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56594 QWRF8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36936 QWRF8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21233 QWRF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45550 SCO3, QWRF1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15423 QWRF8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19963 QWRF2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17313 QWRF2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26567 SCO3, QWRF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50146 QWRF2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56201 QWRF8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005768_P003 QWRF2, Zm00001e005768 QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR007573 QWRF 301 650
No external refs found!