1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00136p00081990

AMTR_s00136p00081990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00136.42

No description available


Gene families : OG0003785 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003785_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00136p00081990

Target Alias Description ECC score Gene Family Method Actions
AT4G32920 No alias glycine-rich protein 0.03 OrthoFinder output from all 47 species
Als_g19063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025604 No alias not classified & original description: CDS=245-4675 0.03 OrthoFinder output from all 47 species
Cba_g16256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g09360.1 LOC_Os05g09360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!